BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025G09LP1|AL428442
(224 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig215 404 e-113
>3x_Contig215
Length = 1068
Score = 404 bits (203), Expect = e-113
Identities = 217/221 (98%), Gaps = 1/221 (0%)
Strand = Plus / Plus
Query: 5 catcgttcgatcctacggtcggacgatggcgtc-ggggagattattattaaatattaata 63
|||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 catcgttcgatcctacggtcagacgatggcgtccggggagattattattaaatattaata 60
Query: 64 agaaaccccgcggctcctccccccggtaatccctttaaaggggaggagtccgcggggaaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agaaaccccgcggctcctccccccggtaatccctttaaaggggaggagtccgcggggaaa 120
Query: 124 gatgtatttacagataaattatttttcaacctttcggttaaatgagttgtatttgtaggg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gatgtatttacagataaattatttttcaacctttcggttaaatgagttgtatttgtaggg 180
Query: 184 aatatatataattccctgcvcgactcacccctaggggtgag 224
||||||||||||||||||| | |||||||||||||||||||
Sbjct: 181 aatatatataattccctgcaccactcacccctaggggtgag 221
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1636
Number of Sequences: 1807
Number of extensions: 1636
Number of successful extensions: 69
Number of sequences better than 1.0e-20: 1
length of query: 224
length of database: 10,358,551
effective HSP length: 16
effective length of query: 208
effective length of database: 10,329,639
effective search space: 2148564912
effective search space used: 2148564912
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 49 (97.9 bits)